miRBase entry: dmo-mir-31b

Stem-loop dmo-mir-31b


Accession
MI0009193
Description
Drosophila mojavensis dmo-mir-31b precursor miRNA
Gene family
MIPF0000064; mir-31


Sequence

caaauaaugaauuUGGCAAGAUGUCGGAAUAGCUGagagcacaaauaucauagaauccagaauuuauauuuuguguauuuuauugaguacagcggcuaugccucaucuagucaauugcauucauuug
(((((((((...(((((.(((((..((.(((((((......................((((((....))))))(((((((....))))))).))))))).)).))))).)))))...)))).)))))

Structure
     -    aau     A     UC  A       agagcacaaauaucauagaauccagaauuuauauuuug       u 
caaau aaug   uUGGC AGAUG  GG AUAGCUG                                      uguauuu a
||||| ||||   ||||| |||||  || |||||||                                      |||||||  
guuua uuac   aacug ucuac  cc uaucggc                                      acaugag u
     c    guu     a     -u  g       -------------------------------------g       u 


Annotation confidence Not enough data
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Genome context
scaffold_6473: 5711151-5711277 [+]

Database links

Mature dmo-miR-31b

Accession MIMAT0008639
Description Drosophila mojavensis dmo-miR-31b mature miRNA
Sequence 14 - UGGCAAGAUGUCGGAAUAGCUG - 35
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218