Stem-loop sequence hsa-mir-1915

Accession

MI0008336 (change log)

Symbol

HGNC:MIR1915

Description

Homo sapiens miR-1915 stem-loop

Gene family

MIPF0001037; mir-1915

Literature search

20 open access papers mention hsa-mir-1915
(31 sentences)

Stem-loop

   ---ug  a      a       u  c     --     g   a 
5'      ag ggccgc ccuugcc ug ugccc  gggcc ugc c
        || |||||| ||||||| || |||||  ||||| |||  
3'      uc ccggcg ggggcgg gc gcggg  cccgg gug c
   agcga  -      -       c  a     ac     -   c 

Deep sequencing

255 reads, 3.45 reads per million, 87 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr10: 21496562-21496641 [-]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:MIR1915
• HGNC:MIR1915
• miRBase Tracker:MI0008336

Mature sequence hsa-miR-1915-5p

• Accession: MIMAT0007891
• Previous IDs: hsa-miR-1915*
• Sequence: 12 - accuugccuugcugcccgggcc - 33
• Deep sequencing: 48 reads, 16 experiments
• Evidence: experimental; 454 [1]
• Predicted targets:
  • TargetMiner:hsa-miR-1915-5p
  • TargetScanVert:hsa-miR-1915-5p
  • miRDB:hsa-miR-1915-5p
  • microrna.org:hsa-miR-1915-5p

Mature sequence hsa-miR-1915-3p

• Accession: MIMAT0007892
• Previous IDs: hsa-miR-1915
• Sequence: 47 - ccccagggcgacgcggcggg - 66
• Deep sequencing: 25 reads, 20 experiments
• Evidence: experimental; 454 [1]
• Predicted targets:
  • TargetMiner:hsa-miR-1915-3p
  • TargetScanVert:hsa-miR-1915-3p
  • miRDB:hsa-miR-1915-3p
  • microrna.org:hsa-miR-1915-3p

References

1. PMID:18583537 "MicroRNA discovery and profiling in human embryonic stem cells by deep sequencing of small RNA libraries" Bar M, Wyman SK, Fritz BR, Qi J, Garg KS, Parkin RK, Kroh EM, Bendoraite A, Mitchell PS, Nelson AM, Ruzzo WL, Ware C, Radich JP, Gentleman R, Ruohola-Baker H, Tewari M Stem Cells. 26:2496-2505(2008).