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miRBase |
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Stem-loop sequence osa-MIR1882e |
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Accession | MI0008292 (change log) | ||||
Description | Oryza sativa miR1882e stem-loop | ||||
Gene family | MIPF0000571; MIR1882 | ||||
Literature search |
2 open access papers mention osa-MIR1882e | ||||
Stem-loop |
--c ua u uuu -c a u u a 5' caa uccuagauugc uucaaggucauuuc agggaaccc auucccaua au cagua cca a ||| ||||||||||| |||||||||||||| ||||||||| ||||||||| || ||||| ||| 3' guu aggaucuaaug agguucuaguaaag ucccuuggg uaaggguau ua gucgu ggu g guc ug c cau aa c u u c |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence osa-miR1882e-5p |
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Accession | MIMAT0007843 |
Sequence |
11 - agauugcuuucaaggucauuucuu - 34 |
Evidence | experimental; 454 [1], Illumina [2] |
Mature sequence osa-miR1882e-3p |
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Accession | MIMAT0015285 |
Sequence |
108 - gaaaugaucuuggacguaaucuag - 131 |
Deep sequencing | 1 reads, 1 experiments |
Evidence | experimental; Illumina [2] |
References |
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1 |
PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains"
Genome Res. 18:1456-1465(2008).
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2 |
PMID:19903869
"Rice MicroRNA effector complexes and targets"
Plant Cell. 21:3421-3435(2009).
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