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miRBase |
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Stem-loop sequence cel-mir-58b |
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Accession | MI0008204 (change log) | |||||
Description | Caenorhabditis elegans miR-58b stem-loop | |||||
Literature search |
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19 open access papers mention cel-mir-58b | |||||
Stem-loop |
---uga ug - 5' cucggug ugaucucuua ccguu ||||||| |||||||||| |||| u 3' gaguuac acuagagaau gguau aaccua ca a |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence cel-miR-58b-5p |
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Accession | MIMAT0020361 |
Previous IDs | cel-miR-1834* |
Sequence |
2 - gacucggugugugaucucuua - 22 |
Deep sequencing | 7 reads, 5 experiments |
Evidence | experimental; Illumina [3] |
Mature sequence cel-miR-58b-3p |
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Accession | MIMAT0006776 |
Previous IDs | cel-miR-1834 |
Sequence |
37 - agagaucaaccauugagauccaa - 59 |
Deep sequencing | 311 reads, 16 experiments |
Evidence | experimental; 454 [1], Illumina [2-3] |
Database links |
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Predicted targets |
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References |
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1 |
PMID:18392026
"Discovering microRNAs from deep sequencing data using miRDeep"
Nat Biotechnol. 26:407-415(2008).
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