Stem-loop sequence hsa-mir-1295a

Accession

MI0006357 (change log)

Previous IDs

hsa-mir-1295

Symbol

HGNC:MIR1295A

Description

Homo sapiens miR-1295a stem-loop

Gene family

MIPF0000676; mir-1295

Stem-loop

   --         ug        c        u   g aau 
5'   aggacauuu  cccagauc guggccua uca a   g
     |||||||||  |||||||| |||||||| ||| |   u
3'   uccuguaaa  gggucuag cgccggau agu u   g
   cc         gu        a        u   g ccg 

Deep sequencing

980 reads, 1.09 reads per million, 92 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr1: 171101728-171101806 [-]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from hsa-mir-1295a

• hsa-mir-1295b: chr1: 171101739-171101798 [+]
• hsa-mir-1295a: chr1: 171101728-171101806 [-]

Database links

• EntrezGene:MIR1295
• HGNC:MIR1295A
• RNAcentral:URS000075C2E2_9606
• miRBase Tracker:MI0006357

Mature sequence hsa-miR-1295a

• Accession: MIMAT0005885
• Previous IDs: hsa-miR-1295
• Sequence: 49 - uuaggccgcagaucuggguga - 69
• Deep sequencing: 972 reads, 91 experiments
• Evidence: experimental; Illumina [1]
• Database links:
  • RNAcentral:URS00005CE113_9606
• Predicted targets:
  • TargetMiner:hsa-miR-1295a
  • TargetScanVert:hsa-miR-1295a
  • miRDB:hsa-miR-1295a
  • microrna.org:hsa-miR-1295a

References

1. PMID:18285502 "Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells" Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA Genome Res. 18:610-621(2008).