Stem-loop sequence hsa-mir-548j

AccessionMI0006345 (change log)
Symbol HGNC:MIR548J
DescriptionHomo sapiens miR-548j stem-loop
Gene family MIPF0000317; mir-548
Literature search

45 open access papers mention hsa-mir-548j
(157 sentences)

   --    agc     -aa    ua                 u     c    g    ac 
5'   gggc   cagug   uagu  gcuggugcaaaaguaau gcggu uuug uauu  u
     ||||   |||||   ||||  ||||||||||||||||| ||||| |||| ||||   
3'   cuug   gucgc   auca  cgaccacguuuucauua cguca aaac guga  u
   ga    --a     aag    uc                 -     a    g    cu 
Get sequence
Deep sequencing
4452 reads, 1.41 reads per million, 142 experiments
Confidence Annotation confidence: high
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (GRCh38; GCA_000001405.15) Overlapping transcripts
chr22: 26555212-26555323 [-]
Database links

Mature sequence hsa-miR-548j-5p

Accession MIMAT0005875

29 - 


 - 50

Get sequence
Deep sequencing4289 reads, 141 experiments
Evidence experimental; Illumina [1]
Database links
Predicted targets

Mature sequence hsa-miR-548j-3p

Accession MIMAT0026737

65 - 


 - 85

Get sequence
Deep sequencing107 reads, 36 experiments
Evidence experimental; Illumina [2]
Database links
Predicted targets


PMID:18285502 "Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells" Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA Genome Res. 18:610-621(2008).
PMID:23226537 "The repertoire and features of human platelet microRNAs" Ple H, Landry P, Benham A, Coarfa C, Gunaratne PH, Provost P PLoS One. 7:e50746(2012).