Stem-loop sequence hsa-mir-1231

Accession

MI0006321 (change log)

Symbol

HGNC:MIR1231

Description

Homo sapiens miR-1231 stem-loop

Gene family

MIPF0001309; mir-1231

Literature search

5 open access papers mention hsa-mir-1231
(5 sentences)

Stem-loop

   gucagugu   -   --      cu     aa    ---a    ---ca    u 
5'         cug ggc  ggacag  gcagg  aggg    agac     aggc u
           ||| |||  ||||||  |||||  ||||    ||||     |||| g
3'         gac ccg  cuuguc  ugucc  uccc    ucug     ucug c
   --------   a   uu      --     ca    accg    accug    u 

Deep sequencing

37 reads, 0 reads per million, 16 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr1: 201808611-201808702 [+]
• Overlapping transcripts:

  sense

  OTTHUMT00000087088 ; IPO9-001; intron 1

  OTTHUMT00000087091 ; IPO9-004; intron 2

  ENST00000361565 ; IPO9-001; intron 1

  ENST00000464348 ; IPO9-004; intron 2

Database links

• EntrezGene:MIR1231
• HGNC:MIR1231
• miRBase Tracker:MI0006321

Mature sequence hsa-miR-1231

• Accession: MIMAT0005586
• Sequence: 5 - gugucugggcggacagcugc - 24
• Deep sequencing: 21 reads, 5 experiments
• Evidence: experimental; cloned [1]
• Predicted targets:
  • TargetMiner:hsa-miR-1231
  • TargetScanVert:hsa-miR-1231
  • miRDB:hsa-miR-1231
  • microrna.org:hsa-miR-1231

References

1. PMID:17964270 "Mammalian mirtron genes" Berezikov E, Chung WJ, Willis J, Cuppen E, Lai EC Mol Cell. 28:328-336(2007).