Stem-loop sequence hsa-mir-944

Accession

MI0005769 (change log)

Symbol

HGNC:MIR944

Description

Homo sapiens miR-944 stem-loop

Gene family

MIPF0000541; mir-944

Literature search

12 open access papers mention hsa-mir-944
(94 sentences)

Stem-loop

               u          a       u      aaauu 
5' guuccagacaca cucaucugau uacaaua uuucuu     g
   |||||||||||| |||||||||| ||||||| ||||||      
3' uagggucugugu gaguaggcua auguuau aaagag     u
               c          c       u      aaaua 

Deep sequencing

8525 reads, 80 reads per million, 120 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr3: 189829922-189830009 [+]
• Overlapping transcripts:

  antisense

  OTTHUMT00000343855 ; LEPREL1-001; intron 1

  OTTHUMT00000343856 ; LEPREL1-002; intron 1

  OTTHUMT00000343858 ; LEPREL1-004; intron 1

  OTTHUMT00000343857 ; LEPREL1-003; intron 1

  ENST00000319332 ; LEPREL1-001; intron 1

  ENST00000427335 ; LEPREL1-002; intron 1

  ENST00000444866 ; LEPREL1-004; intron 1

  ENST00000426003 ; LEPREL1-003; intron 1

Database links

• EntrezGene:MIR944
• HGNC:MIR944
• RNAcentral:URS0000663F9C_9606
• miRBase Tracker:MI0005769

Mature sequence hsa-miR-944

• Accession: MIMAT0004987
• Sequence: 54 - aaauuauuguacaucggaugag - 75
• Deep sequencing: 8467 reads, 120 experiments
• Evidence: experimental; cloned [1]
• Database links:
  • RNAcentral:URS000004203C_9606
• Predicted targets:
  • TargetMiner:hsa-miR-944
  • TargetScanVert:hsa-miR-944
  • miRDB:hsa-miR-944
  • microrna.org:hsa-miR-944

References

1. PMID:17616659 "Patterns of known and novel small RNAs in human cervical cancer" Lui WO, Pourmand N, Patterson BK, Fire A Cancer Res. 67:6031-6043(2007).