Stem-loop mtr-MIR156g

Accession

MI0005607

Description

Medicago truncatula mtr-MIR156g precursor miRNA

Gene family

MIPF0000008; MIR156

Literature search

10 open access papers mention mtr-MIR156g
(78 sentences)

Sequence

gguugUUGACAGAAGAUAGAGGGCACuaaggaugauaugcauacacauauauauacaacauggaggaggagcuuaauugcauuucauuuccuuuguGCUCUCUAGACUUCUGUCAUCacc
(((.(.(((((((((.((((((((((.((((((((.(((((.....................(((......)))...))))).)))..))))).))))))))))..))))))))).))))

Structure

   u U         -A          u     --   u     uacacauauauauacaacaug   ga 
ggu g UGACAGAAG  UAGAGGGCAC aagga  uga augca                     gag  g
||| | |||||||||  |||||||||| |||||  ||| |||||                     |||   
cca C ACUGUCUUC  AUCUCUCGug uuccu  acu uacgu                     uuc  g
   - U         AG          u     uu   u     ------------------uaa   ga 

Annotation confidence Not enough data

Genome context

chr6: 18847298-18847417 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mtr-MIR156g

Mature mtr-miR156g-5p

• Accession: MIMAT0011093
• Description: Medicago truncatula mtr-miR156g-5p mature miRNA
• Sequence: 6 - UUGACAGAAGAUAGAGGGCAC - 26
• Evidence: experimental ; Illumina [2]

Mature mtr-miR156g-3p

• Accession: MIMAT0026728
• Description: Medicago truncatula mtr-miR156g-3p mature miRNA
• Sequence: 97 - GCUCUCUAGACUUCUGUCAUC - 117
• Evidence: experimental ; Illumina [2]

References

1. 
   "Bonnet E"
   (2007) None:


2. PubMed ID: 23572382
   microRNA profiling of root tissues and root forming explant cultures in Medicago truncatula
   "Eyles RP, Williams PH, Ohms SJ, Weiller GF, Ogilvie HA, Djordjevic MA, Imin N"
   "Planta (2013) 238:91-105