miRBase entry: hsa-mir-374b

Stem-loop hsa-mir-374b


Accession
MI0005566
Symbol
HGNC: MIR374B
Description
Homo sapiens hsa-mir-374b precursor miRNA
Gene family
MIPF0000288; mir-374

Literature search
60 open access papers mention hsa-mir-374b
(150 sentences)

Sequence

261515 reads, 1430 reads per million, 144 experiments
acucggauggAUAUAAUACAACCUGCUAAGUGuccuagcaCUUAGCAGGUUGUAUUAUCAUUguccgugucu
((.(((((((..(((((((((((((((((((((....)))))))))))))))))))))..))))))).))..

Structure
--  u       AU                     c 
  ac cggaugg  AUAAUACAACCUGCUAAGUGu c
  || |||||||  |||||||||||||||||||||  
  ug gccugUU  UAUUAUGUUGGACGAUUCacg u
uc  u       AC                     a 


Annotation confidence High
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Comments
This sequence was identified as a miRNA candidate by Berezikov et al. using RAKE and MPSS techniques [1]. Expression was later confirmed by cloning [2].

Genome context
chrX: 74218547-74218618 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from hsa-mir-374b
Name Accession Chromosome Start End Strand Confidence




Disease association
hsa-mir-374b is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-374b-5p

Accession MIMAT0004955
Description Homo sapiens hsa-miR-374b-5p mature miRNA
Sequence 11 - AUAUAAUACAACCUGCUAAGUG - 32
Evidence experimental
cloned [2-3]
Database links
Predicted targets

Mature hsa-miR-374b-3p

Accession MIMAT0004956
Description Homo sapiens hsa-miR-374b-3p mature miRNA
Sequence 41 - CUUAGCAGGUUGUAUUAUCAUU - 62
Evidence experimental
cloned [2]
Database links
Predicted targets

References

  1. PubMed ID: 17604727
    A mammalian microRNA expression atlas based on small RNA library sequencing
    "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
    "Cell (2007) 129:1401-1414

  2. PubMed ID: 17616659
    Patterns of known and novel small RNAs in human cervical cancer
    "Lui WO, Pourmand N, Patterson BK, Fire A"
    "Cancer Res (2007) 67:6031-6043

  3. PubMed ID: 16954537
    Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis
    "Berezikov E, van Tetering G, Verheul M, van de Belt J, van Laake L, Vos J, Verloop R, van de Wetering M, Guryev V, Takada S, van Zonneveld AJ, Mano H, Plasterk R, Cuppen E"
    "Genome Res (2006) 16:1289-1298