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miRBase |
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Stem-loop sequence cel-mir-785 |
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Accession | MI0005185 (change log) | |||||||
Description | Caenorhabditis elegans miR-785 stem-loop | |||||||
Gene family | MIPF0000896; mir-785 | |||||||
Stem-loop |
uu u c a uu a gaaacc 5' gcuc uuuc cacc auc gcacagaau uucgcu aca u |||| |||| |||| ||| ||||||||| |||||| ||| c 3' cgag aaag gugg uag uguguuuug aaguga ugu a -u - - a uu a aacaaa |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence cel-miR-785-5p |
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Accession | MIMAT0032015 |
Sequence |
20 - agcacagaauuuuucgcuaaca - 41 |
Deep sequencing | 4 reads, 3 experiments |
Evidence | experimental; 454 [1] |
Mature sequence cel-miR-785-3p |
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Accession | MIMAT0004220 |
Previous IDs | cel-miR-785 |
Sequence |
59 - uaagugaauuguuuuguguaga - 80 |
Deep sequencing | 11164 reads, 16 experiments |
Evidence | experimental; 454 [1], Illumina [2], CLIPseq [3] |
Database links |
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Predicted targets |
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References |
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1 |
PMID:17174894
"Large-scale sequencing reveals 21U-RNAs and additional microRNAs and endogenous siRNAs in C. elegans"
Cell. 127:1193-1207(2006).
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2 | |
3 |
PMID:20062054
"Comprehensive discovery of endogenous Argonaute binding sites in Caenorhabditis elegans"
Nat Struct Mol Biol. 17:173-179(2010).
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