Stem-loop sequence bta-mir-93

AccessionMI0005050 (change log)
DescriptionBos taurus miR-93 stem-loop
Gene family MIPF0000001; mir-17
Literature search

8 open access papers mention bta-mir-93
(60 sentences)

Stem-loop 
   cug       -ca        -    u    g   u  g u 
5'    ggggcuc   aagugcug uucg gcag uag gu a c
      |||||||   |||||||| |||| |||| ||| || | a
3'    ccccgag   uucacgac gagu cguc auc ca u c
   ---       ccc        c    -    -   -  g c
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Deep sequencing
67114 reads, 546 reads per million, 76 experiments
Confidence Annotation confidence: high
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Genome context
Coordinates (Btau_5.0.1; GCA_000003205.6) Overlapping transcripts
chr25: 37072517-37072593 [+]
sense
ENSBTAT00000003728 ; MCM7-201; intron 13
Clustered miRNAs
< 10kb from bta-mir-93
bta-mir-106bchr25: 37072314-37072393 [+]
bta-mir-93chr25: 37072517-37072593 [+]
bta-mir-25chr25: 37072717-37072800 [+]
Database links

Mature sequence bta-miR-93

Accession MIMAT0003837
Sequence

11 -  

caaagugcuguucgugcaggua

 - 32

Get sequence
Deep sequencing66799 reads, 75 experiments
Evidence experimental; cloned [1]
Predicted targets

References

1
PMID:17105755 "Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues" Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP Physiol Genomics. 29:35-43(2007).