miRBase entry: bta-mir-148b

Stem-loop bta-mir-148b


Accession
MI0005030
Description
Bos taurus bta-mir-148b precursor miRNA
Gene family
MIPF0000056; mir-148

Literature search
20 open access papers mention bta-mir-148b
(88 sentences)

Sequence

22848 reads, 279 reads per million, 73 experiments
uuagcauuugaggugaaguucuguuauacacucaggcuguggcucucugaaagUCAGUGCAUCACAGAACUUUGUcucgaaagcuuucua
..(((.((((((((((((((((((.((.((((..((((.............)))))))).)).)))))))))))))))))).))).....

Structure
---uu   a                  u  a    ca    guggc 
     agc uuugaggugaaguucugu au cacu  ggcu     u
     ||| |||||||||||||||||| || ||||  ||||     c
     ucg aagcucUGUUUCAAGACA UA GUGA  CUga     u
aucuu   a                  C  C    --    aaguc 


Annotation confidence High
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Genome context
chr5: 25896187-25896276 [-]

Database links

Mature bta-miR-148b

Accession MIMAT0003814
Description Bos taurus bta-miR-148b mature miRNA
Sequence 54 - UCAGUGCAUCACAGAACUUUGU - 75
Evidence experimental
cloned [1-2]

References

  1. PubMed ID: 17105755
    Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
    "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
    "Physiol Genomics (2007) 29:35-43

  2. PubMed ID: 17306260
    Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland
    "Gu Z, Eleswarapu S, Jiang H"
    "FEBS Lett (2007) 581:981-988