Stem-loop sequence hsa-mir-1468

Accession

MI0003782 (change log)

Symbol

HGNC:MIR1468

Description

Homo sapiens miR-1468 stem-loop

Gene family

MIPF0000777; mir-1468

Literature search

3 open access papers mention hsa-mir-1468
(137 sentences)

Stem-loop

        gu gu  c         c     c     -u   cau 
5' ggugg  g  uu uccguuugc uguuu gcuga  gug   u
   |||||  |  || ||||||||| ||||| |||||  |||   c
3' cuacc  c  aa agguaaacg auaaa cgacu  uac   a
        ug uu  a         a     a     cu   uca 

Deep sequencing

941 reads, 0.8 reads per million, 125 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Comments

This sequence was identified as a miRNA candidate by Berezikov et al [1], and confirmed later by cloning [2].

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chrX: 63786002-63786087 [-]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:MIR1468
• HGNC:MIR1468
• RNAcentral:URS000075CE25_9606
• miRBase Tracker:MI0003782

Mature sequence hsa-miR-1468-5p

• Accession: MIMAT0006789
• Sequence: 13 - cuccguuugccuguuucgcug - 33
• Deep sequencing: 928 reads, 125 experiments
• Evidence: experimental; cloned [2], Illumina [3]
• Database links:
  • RNAcentral:URS00002ECEE4_9606
• Predicted targets:
  • TargetScanVert:hsa-miR-1468-5p
  • miRDB:hsa-miR-1468-5p
  • microrna.org:hsa-miR-1468-5p

Mature sequence hsa-miR-1468-3p

• Accession: MIMAT0026638
• Sequence: 55 - agcaaaauaagcaaauggaaaa - 76
• Deep sequencing: 11 reads, 10 experiments
• Evidence: experimental; Illumina [3]
• Predicted targets:
  • TargetScanVert:hsa-miR-1468-3p
  • miRDB:hsa-miR-1468-3p

References

1. PMID:16954537 "Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis" Berezikov E, van Tetering G, Verheul M, van de Belt J, van Laake L, Vos J, Verloop R, van de Wetering M, Guryev V, Takada S, van Zonneveld AJ, Mano H, Plasterk R, Cuppen E Genome Res. 16:1289-1298(2006).
2. PMID:18402656 "Hidden layers of human small RNAs" Kawaji H, Nakamura M, Takahashi Y, Sandelin A, Katayama S, Fukuda S, Daub CO, Kai C, Kawai J, Yasuda J, Carninci P, Hayashizaki Y BMC Genomics. 9:157(2008).
3. PMID:23034410 "Birth and expression evolution of mammalian microRNA genes" Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H Genome Res. 23:34-45(2013).