miRBase entry: hsa-mir-320c-1

Stem-loop hsa-mir-320c-1


Accession
MI0003778
Symbol
HGNC: MIR320C1
Description
Homo sapiens hsa-mir-320c-1 precursor miRNA
Gene family
MIPF0000163; mir-320

Literature search
145 open access papers mention hsa-mir-320c-1
(606 sentences)

Sequence

657951 reads, 2360 reads per million, 136 experiments
aaaaaugaggccuucucuucccaguucuucccagagucaggAAAAGCUGGGUUGAGAGGGUagaaaaaaaau
.........((((((((..(((((((.((((........)))).)))))))..))))))))...........

Structure
--aaaaaugag        uu       c    cag 
           gccuucuc  cccaguu uucc   a
           ||||||||  ||||||| ||||    
           UGGGAGAG  GGGUCGA AAgg   g
uaaaaaaaaga        UU       A    acu 


Annotation confidence Not enough data
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Comments
This sequence was identified as a candidate by RAKE analysis [1], and later confirmed by Solexa sequencing [2].

Genome context
chr18: 21683518-21683589 [+]

Disease association
hsa-mir-320c-1 is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-320c

Accession MIMAT0005793
Description Homo sapiens hsa-miR-320c mature miRNA
Sequence 42 - AAAAGCUGGGUUGAGAGGGU - 61
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 16954537
    Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis
    "Berezikov E, van Tetering G, Verheul M, van de Belt J, van Laake L, Vos J, Verloop R, van de Wetering M, Guryev V, Takada S, van Zonneveld AJ, Mano H, Plasterk R, Cuppen E"
    "Genome Res (2006) 16:1289-1298

  2. PubMed ID: 18392026
    Discovering microRNAs from deep sequencing data using miRDeep
    "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
    "Nat Biotechnol (2008) 26:407-415