Stem-loop hsa-mir-647

Accession

MI0003662

Symbol

HGNC: MIR647

Description

Homo sapiens hsa-mir-647 precursor miRNA

Gene family

MIPF0000939; mir-647

Literature search

8 open access papers mention hsa-mir-647
(24 sentences)

Sequence

2 reads, 0 reads per million, 2 experiments

aggaaguguuggccuGUGGCUGCACUCACUUCCUUCagccccaggaagccuuggucgggggcaggagggagggucaggcagggcugggggccugac
..........(((((.(((((((.((..((((((((.(((((..((........)).)))))..))))))))...))))..))))).)))))....

Structure

aggaaguguu     G     --  A  -CA        -a     ag  agc 
          ggccu UGGCU  GC CU   CUUCCUUC  gcccc  ga   c
          ||||| |||||  || ||   ||||||||  |||||  ||    
          ccggg gucgg  cg ga   ggagggag  cgggg  cu   u
------cagu     g     ga  -  cug        ga     -g  ggu 

Annotation confidence Not enough data

Genome context

chr20: 63942631-63942726 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from hsa-mir-647

Disease association

hsa-mir-647 is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-647

• Accession: MIMAT0003317
• Description: Homo sapiens hsa-miR-647 mature miRNA
• Sequence: 16 - GUGGCUGCACUCACUUCCUUC - 36
• Evidence: experimental ; Microarray [1], SAGE [1]

References

1. PubMed ID: 16505370
   The colorectal microRNAome
   "Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE"
   "Proc Natl Acad Sci U S A (2006) 103:3687-3692