Stem-loop sequence hsa-mir-637

Accession

MI0003652 (change log)

Symbol

HGNC:MIR637

Description

Homo sapiens miR-637 stem-loop

Gene family

MIPF0000597; mir-637

Literature search

17 open access papers mention hsa-mir-637
(28 sentences)

Stem-loop

   --------  -  ua  gu  -u      --   u     c   --   u  -  uc 
5'         ug gc  ag  gu  ggcucg  ggc cccca ugc  agu ac cc  c
           || ||  ||  ||  ||||||  ||| ||||| |||  ||| || ||  c
3'         ac cg  uc  cg  ucgggc  ucg ggggu acg  uca ug gg  c
   cuucauag  a  --  ug  uc      uu   -     c   ag   u  c  cu 

Deep sequencing

11 reads, 37.5 reads per million, 8 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr19: 3961414-3961512 [-]
• Overlapping transcripts:

  sense

  OTTHUMT00000457878 ; DAPK3-004; exon 1

  OTTHUMT00000457817 ; DAPK3-001; intron 6

  ENST00000595279 ; DAPK3-004; exon 1

  ENST00000385000 ; MIR637-201; exon 1

  ENST00000301264 ; DAPK3-201; intron 5

  ENST00000545797 ; DAPK3-001; intron 6

Database links

• EntrezGene:MIR637
• HGNC:MIR637
• miRBase Tracker:MI0003652

Mature sequence hsa-miR-637

• Accession: MIMAT0003307
• Sequence: 61 - acugggggcuuucgggcucugcgu - 84
• Deep sequencing: 1 reads, 1 experiments
• Evidence: experimental; SAGE [1]
• Predicted targets:
  • TargetMiner:hsa-miR-637
  • TargetScanVert:hsa-miR-637
  • miRDB:hsa-miR-637
  • microrna.org:hsa-miR-637

References

1. PMID:16505370 "The colorectal microRNAome" Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE Proc Natl Acad Sci U S A. 103:3687-3692(2006).