Stem-loop sequence hsa-mir-626

Accession

MI0003640 (change log)

Symbol

HGNC:MIR626

Description

Homo sapiens miR-626 stem-loop

Gene family

MIPF0000474; mir-626

Literature search

7 open access papers mention hsa-mir-626
(13 sentences)

Stem-loop

   acugauauauuu     auu     gc      g        u   au    au 
5'             gucuu   ugaga  ugagga uauuuuua gca  cuga  g
               |||||   |||||  |||||| |||||||| |||  ||||   
3'             cggaa   auuuu  acuucu guaaaagu ugu  gacu  a
   ----------uu     ---     -a      -        c   -c    cu 

Deep sequencing

17 reads, 0 reads per million, 11 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr15: 41691585-41691678 [+]
• Overlapping transcripts:

  antisense

  OTTHUMT00000252692 ; NDUFAF1-001; intron 1

  OTTHUMT00000419571 ; NDUFAF1-002; intron 1

  OTTHUMT00000419572 ; NDUFAF1-003; intron 1

  OTTHUMT00000419573 ; NDUFAF1-004; intron 1

  ENST00000260361 ; NDUFAF1-001; intron 1

  ENST00000559127 ; NDUFAF1-002; intron 1

  ENST00000560978 ; NDUFAF1-003; intron 1

  ENST00000558719 ; NDUFAF1-004; intron 1

Database links

• EntrezGene:MIR626
• HGNC:MIR626
• miRBase Tracker:MI0003640

Mature sequence hsa-miR-626

• Accession: MIMAT0003295
• Sequence: 61 - agcugucugaaaaugucuu - 79
• Deep sequencing: 12 reads, 7 experiments
• Evidence: experimental; SAGE [1]
• Predicted targets:
  • TargetMiner:hsa-miR-626
  • TargetScanVert:hsa-miR-626
  • miRDB:hsa-miR-626
  • microrna.org:hsa-miR-626

References

1. PMID:16505370 "The colorectal microRNAome" Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE Proc Natl Acad Sci U S A. 103:3687-3692(2006).