Stem-loop sequence hsa-mir-596

AccessionMI0003608 (change log)
Symbol HGNC:MIR596
DescriptionHomo sapiens miR-596 stem-loop
Gene family MIPF0000808; mir-596
Literature search

13 open access papers mention hsa-mir-596
(44 sentences)

Stem-loop 
   agca     uc       ccu  -c     -  --u     ac 
5'     cggcc  uccgaag   gc  cggcu cc   cggga  c
       |||||  |||||||   ||  ||||| ||   |||||  u
3'     gccgg  aggcuuc   cg  gucga gg   gcccu  g
   ----     --       --c  uc     c  uac     cc
Get sequence
Deep sequencing
8 reads, 0 reads per million, 6 experiments
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (GRCh38; GCA_000001405.15) Overlapping transcripts
chr8: 1817231-1817307 [+]
sense
OTTHUMT00000374593 ; ARHGEF10-006; intron 3
OTTHUMT00000374594 ; ARHGEF10-007; intron 3
OTTHUMT00000374592 ; ARHGEF10-008; intron 4
OTTHUMT00000374589 ; ARHGEF10-003; intron 6
OTTHUMT00000374590 ; ARHGEF10-002; intron 6
OTTHUMT00000374591 ; ARHGEF10-001; intron 7
ENST00000520972 ; ARHGEF10-006; intron 3
ENST00000522969 ; ARHGEF10-007; intron 3
ENST00000382795 ; ARHGEF10-008; intron 4
ENST00000349830 ; ARHGEF10-003; intron 6
ENST00000520359 ; ARHGEF10-002; intron 6
ENST00000398564 ; ARHGEF10-203; intron 6
ENST00000262112 ; ARHGEF10-201; intron 6
ENST00000518288 ; ARHGEF10-001; intron 7
ENST00000398560 ; ARHGEF10-202; intron 7
Database links

Mature sequence hsa-miR-596

Accession MIMAT0003264
Sequence

16 -  

aagccugcccggcuccucggg

 - 36

Get sequence
Deep sequencing2 reads, 2 experiments
Evidence experimental; SAGE [1]
Predicted targets

References

1
PMID:16505370 "The colorectal microRNAome" Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE Proc Natl Acad Sci U S A. 103:3687-3692(2006).