Stem-loop sequence osa-MIR531a

Accession

MI0003204 (change log)

Previous IDs

osa-MIR531

Description

Oryza sativa miR531 stem-loop

Gene family

MIPF0000607; MIR531

Literature search

8 open access papers mention osa-MIR531a
(15 sentences)

Stem-loop

          c     cu      c     c        -  c 
5' ggcgccg cgagc  ugcucg cgggg ugcgugcc gc a
   ||||||| |||||  |||||| ||||| |||||||| ||  
3' ccguggc gcucg  gcgagc gcccc acgcgcgg cg u
          a     uu      u     u        u  a 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (MSU7): Chr8: 1220358-1220438 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0003204

Mature sequence osa-miR531a

• Accession: MIMAT0002887
• Previous IDs: osa-miR531
• Sequence: 18 - cucgccggggcugcgugccgccau - 41
• Evidence: experimental; Northern [1]

References

1. PMID:16126864 "Loss of function of OsDCL1 affects microRNA accumulation and causes developmental defects in rice" Liu B, Li P, Li X, Liu C, Cao S, Chu C, Cao X Plant Physiol. 139:296-305(2005).