miRBase entry: hsa-mir-526a-1

Stem-loop hsa-mir-526a-1


Accession
MI0003157
Symbol
HGNC: MIR526A1
Description
Homo sapiens hsa-mir-526a-1 precursor miRNA
Gene family
MIPF0000020; mir-515

Literature search
11 open access papers mention hsa-mir-526a-1
(24 sentences)

Sequence

12 reads, 15 reads per million, 7 experiments
cucaggcugugaccCUCUAGAGGGAAGCACUUUCUGuugcuugaaagaagaGAAAGCGCUUCCUUUUAGAGGAuuacucuuugag
((((((..((((.(((((((((((((((.((((((.((.((....)))).)))))).))))))))))))))).))))..))))))

Structure
      cu    c               A      G  g  u 
cucagg  guga cCUCUAGAGGGAAGC CUUUCU uu cu g
||||||  |||| ||||||||||||||| |||||| || ||  
gaguuu  cauu GGAGAUUUUCCUUCG GAAAGa aa ga a
      cu    A               C      g  -  a 


Annotation confidence Not enough data
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Genome context
chr19: 53706252-53706336 [+]
Clustered miRNAs
10 other miRNAs are < 10 kb from hsa-mir-526a-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature hsa-miR-526a-5p

Accession MIMAT0002845
Description Homo sapiens hsa-miR-526a-5p mature miRNA
Sequence 15 - CUCUAGAGGGAAGCACUUUCUG - 36
Evidence experimental
array-cloned [1], cloned [2]

Mature hsa-miR-526a-3p

Accession MIMAT0037326
Description Homo sapiens hsa-miR-526a-3p mature miRNA
Sequence 52 - GAAAGCGCUUCCUUUUAGAGGA - 73
Evidence experimental
Illumina [3]

References

  1. PubMed ID: 17604727
    A mammalian microRNA expression atlas based on small RNA library sequencing
    "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
    "Cell (2007) 129:1401-1414

  2. PubMed ID: 15965474
    Identification of hundreds of conserved and nonconserved human microRNAs
    "Bentwich I, Avniel A, Karov Y, Aharonov R, Gilad S, Barad O, Barzilai A, Einat P, Einav U, Meiri E, Sharon E, Spector Y, Bentwich Z"
    "Nat Genet (2005) 37:766-770

  3. PubMed ID: 25822230
    Selective microRNA-Offset RNA expression in human embryonic stem cells
    Asikainen S, Heikkinen L, Juhila J, Holm F, Weltner J, Trokovic R, Mikkola M, Toivonen S, Balboa D, Lampela R, Icay K, Tuuri T, Otonkoski T, Wong G, Hovatta O
    PLoS One (2015) 10:e0116668