miRBase entry: hsa-mir-518b

Stem-loop hsa-mir-518b


Accession
MI0003156
Symbol
HGNC: MIR518B
Description
Homo sapiens hsa-mir-518b precursor miRNA
Gene family
MIPF0000020; mir-515

Literature search
27 open access papers mention hsa-mir-518b
(100 sentences)

Sequence

154 reads, 10 reads per million, 18 experiments
ucaugcuguggcccuccagagggaagcgcuuucuguugucugaaagaaaaCAAAGCGCUCCCCUUUAGAGGUuuacgguuuga
(((.(((((((.((((.((((((.(((((((..((((.(((...))).))))))))))).)))))).)))).))))))).)))

Structure
   u       c    c      a       uc    g   g 
uca gcugugg ccuc agaggg agcgcuu  uguu ucu  
||| ||||||| |||| |||||| |||||||  |||| ||| a
agu uggcauu GGAG UUUCCC UCGCGAA  ACaa aga  
   u       U    A      C       --    a   a 


Annotation confidence Not enough data
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Genome context
chr19: 53702737-53702819 [+]
Clustered miRNAs
11 other miRNAs are < 10 kb from hsa-mir-518b
Name Accession Chromosome Start End Strand Confidence




Disease association
hsa-mir-518b is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-518b

Accession MIMAT0002844
Description Homo sapiens hsa-miR-518b mature miRNA
Sequence 51 - CAAAGCGCUCCCCUUUAGAGGU - 72
Evidence experimental
array-cloned [1], cloned [2]
Database links
Predicted targets

References

  1. PubMed ID: 17604727
    A mammalian microRNA expression atlas based on small RNA library sequencing
    "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
    "Cell (2007) 129:1401-1414

  2. PubMed ID: 15965474
    Identification of hundreds of conserved and nonconserved human microRNAs
    "Bentwich I, Avniel A, Karov Y, Aharonov R, Gilad S, Barad O, Barzilai A, Einat P, Einav U, Meiri E, Sharon E, Spector Y, Bentwich Z"
    "Nat Genet (2005) 37:766-770