![]() |
miRBase |
![]() |
![]() |
Stem-loop sequence ptc-MIR398c |
|||||
Accession | MI0002337 (change log) | ||||
Description | Populus trichocarpa miR398c stem-loop | ||||
Gene family | MIPF0000107; MIR398 | ||||
Literature search |
![]()
5 open access papers mention ptc-MIR398c | ||||
Stem-loop |
aggau ua a aau gg g ------ u 5' ucc cagg gcgaccuga cacaugu gcu c accc c ||| |||| ||||||||| ||||||| ||| | |||| 3' ggg gucc cgcuggacu guguaca cga g uggg c -uuuc cc c cuu -a - uucuau u |
||||
Confidence |
Annotation confidence: not enough data
| ||||
Genome context |
|
||||
Database links |
|
Mature sequence ptc-miR398c-5p |
|
Accession | MIMAT0022912 |
Sequence |
13 - ggagcgaccugaaaucacaug - 33 |
Evidence | experimental; miRNAseq [2] |
Mature sequence ptc-miR398c-3p |
|
Accession | MIMAT0002043 |
Previous IDs | ptc-miR398c |
Sequence |
68 - uguguucucaggucgccccug - 88 |
Evidence | experimental; miRNAseq [2] |
References |
|
1 |
PMID:16973872
"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)"
Science. 313:1596-1604(2006).
|
2 |
PMID:22442676
"Deep annotation of Populus trichocarpa microRNAs from diverse tissue sets"
PLoS One. 7:e33034(2012).
|