Accession
MI0002268
Description
Populus trichocarpa
ptc-MIR169r precursor miRNA
Gene family
MIPF0000012;
MIR169_1
Literature search
9 open access papers mention ptc-MIR169r
(12 sentences)
(12 sentences)
Sequence
gaggguuuggUAGCCAAGGAUGACUUGCCUAuuuccuccauaaggcuuuaaaaagcaugaaaugugguuuagagcucaauugaaggguucauaggcagucuacuuugguuauccuagcu
...((((.(((((((((((..((((.((((((.((((.((...(((((((((..((((...))))..)))))))))....)).))))...))))))))))..)))))))))))..))))
...((((.(((((((((((..((((.((((((.((((.((...(((((((((..((((...))))..)))))))))....)).))))...))))))))))..)))))))))))..))))
Structure
gag -u AU U --u c -uaa aa g gguu ggUAGCCAAGG GACU GCCUAu uccu ca ggcuuuaaa gcau |||| ||||||||||| |||| |||||| |||| || ||||||||| |||| a ucga cuauugguuuc cuga cggaua ggga gu ucgagauuu ugua --- uc au - cuu a uaac gg a
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
CM000351.2: 12082579-12082697 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ptc-MIR169r
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ptc-miR169r
| Accession | MIMAT0001974 |
| Description | Populus trichocarpa ptc-miR169r mature miRNA |
| Sequence | 11 - UAGCCAAGGAUGACUUGCCUA - 31 |
| Evidence | not_experimental |
References
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