Stem-loop sequence dre-mir-129-2

AccessionMI0001982 (change log)
DescriptionDanio rerio miR-129-2 stem-loop
Gene family MIPF0000073; mir-129
Literature search

4 open access papers mention dre-mir-129-2
(16 sentences)

Stem-loop 
          a     -       c   cu      g     cuca 
5' gucuuuc cgaau cuuuuug ggu  gggcuu cuguu    a
   ||||||| ||||| ||||||| |||  |||||| |||||     
3' cgggagg guuua gaaaaac cca  cccgaa gguaa    c
          c     c       c   uu      g     cuau
Get sequence
Deep sequencing
536 reads, 11.1 reads per million, 9 experiments
Confidence Annotation confidence: high
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Genome context
Coordinates (GRCz11; GCA_000002035.4) Overlapping transcripts
chr7: 50287933-50288019 [-]
intergenic
Database links

Mature sequence dre-miR-129-5p

Accession MIMAT0001825
Previous IDsdre-miR-129
Sequence

14 -  

cuuuuugcggucugggcuugcu

 - 35

Get sequence
Deep sequencing1532 reads, 9 experiments
Evidence experimental; cloned [1]

Mature sequence dre-miR-129-3p

Accession MIMAT0003158
Previous IDsdre-miR-129*
Sequence

55 -  

aagcccuuaccccaaaaagcau

 - 76

Get sequence
Deep sequencing305 reads, 5 experiments
Evidence experimental; array [2]

References

1
PMID:15937218 "The developmental miRNA profiles of zebrafish as determined by small RNA cloning" Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T Genes Dev. 19:1288-1293(2005).
2
PMID:15919954 "MicroRNA expression in zebrafish embryonic development" Wienholds E, Kloosterman WP, Miska E, Alvarez-Saavedra E, Berezikov E, de Bruijn E, Horvitz HR, Kauppinen S, Plasterk RH Science. 309:310-311(2005).