Accession
MI0001959
Description
Danio rerio
dre-mir-100-2 precursor miRNA
Gene family
MIPF0000033;
mir-10
Literature search
5 open access papers mention dre-mir-100-2
(9 sentences)
(9 sentences)
Sequence
53842
reads,
4248
reads per million, 11 experiments
agcugccacaAACCCGUAGAUCCGAACUUGUGgugucucugugcaCAAGCUCGUGUCUAUAGGUAUGugucugcg
.((.(.((((.(((.((((((.(((.((((((...........)))))).))).)))))).))).)))).).)).
.((.(.((((.(((.((((((.(((.((((((...........)))))).))).)))))).))).)))).).)).
Structure
a u c A C C A gugu gc g caca ACC GUAGAU CGA CUUGUG c || | |||| ||| |||||| ||| |||||| u cg c guGU UGG UAUCUG GCU GAACac c g u u A A U C gugu
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr5: 29990147-29990221 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from dre-mir-100-2
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dre-miR-100-5p
| Accession | MIMAT0001813 |
| Description | Danio rerio dre-miR-100-5p mature miRNA |
| Sequence | 11 - AACCCGUAGAUCCGAACUUGUG - 32 |
| Evidence |
experimental
cloned [1] |
| Database links |
|
| Predicted targets |
|
Mature dre-miR-100-2-3p
| Accession | MIMAT0031958 |
| Description | Danio rerio dre-miR-100-2-3p mature miRNA |
| Sequence | 46 - CAAGCUCGUGUCUAUAGGUAUG - 67 |
| Evidence | not_experimental |
| Database links |
|
References
|
