Stem-loop dre-mir-430a-1

Accession

MI0001527

Description

Danio rerio dre-mir-430a-1 precursor miRNA

Gene family

MIPF0000003; mir-430

Literature search

38 open access papers mention dre-mir-430a-1
(204 sentences)

Sequence

2378642 reads, 77906 reads per million, 5 experiments

gucacuaucggugcccucacaaaggcacugacuuggaugcugcauguggUAAGUGCUAUUUGUUGGGGUAGuuucaagugac
((((((...(.((((((.(((((((((((.(((...(((...)))..))).)))))).))))).)))))).)....))))))

Structure

      -auc g      c     -      g   ugg   c 
gucacu    g ugcccu acaaa ggcacu acu   aug  
||||||    | |||||| ||||| |||||| |||   ||| u
caguga    u AUGGGG UGUUU UCGUGA Ugg   uac  
      acuu G      U     A      A   -ug   g 

Annotation confidence Not enough data

Genome context

chr10: 4493277-4493358 [+]

Mature dre-miR-430a-3p

• Accession: MIMAT0001423
• Description: Danio rerio dre-miR-430a-3p mature miRNA
• Sequence: 50 - UAAGUGCUAUUUGUUGGGGUAG - 71
• Evidence: experimental ; cloned [1-2]

References

1. PubMed ID: 15937218
   The developmental miRNA profiles of zebrafish as determined by small RNA cloning
   "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
   "Genes Dev (2005) 19:1288-1293


2. PubMed ID: 15774722
   MicroRNAs regulate brain morphogenesis in zebrafish
   "Giraldez AJ, Cinalli RM, Glasner ME, Enright AJ, Thomson JM, Baskerville S, Hammond SM, Bartel DP, Schier AF"
   "Science (2005) 308:833-838