Stem-loop sequence sbi-MIR169b

AccessionMI0001515 (change log)
DescriptionSorghum bicolor miR169b stem-loop
Gene family MIPF0000037; MIR169_2
Literature search

4 open access papers mention sbi-MIR169b
(25 sentences)

Stem-loop 
   c         ug          -u   u   u  aua   u   a  ca  a 
5'  agccaagga  acuugccgga  aug gca gc   ugu aca gg  gc u
    |||||||||  ||||||||||  ||| ||| ||   ||| ||| ||  ||  
3'  ucgguuccu  ugaacggccu  ugu cgu cg   aca ugu cc  cg a
   a         gu          cu   c   c  --a   u   c  -a  u
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Sorghum_bicolor_NCBIv3; GCA_000003195.3) Overlapping transcripts
chr10: 56120427-56120528 [-]
intergenic
Database links

Mature sequence sbi-miR169b

Accession MIMAT0001409
Sequence

1 -  

cagccaaggaugacuugccgg

 - 21

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Evidence by similarity; MI0000976

References

1
"Identifying microRNAs in plant genomes" Maher C, Timmermans M, Stein L, Ware D Proc IEEE CSB :718-723(2004).
2
PMID:15660154 "Sorghum genome sequencing by methylation filtration" Bedell JA, Budiman MA, Nunberg A, Citek RW, Robbins D, Jones J, Flick E, Rholfing T, Fries J, Bradford K, McMenamy J, Smith M, Holeman H, Roe BA, Wiley G, Korf IF, Rabinowicz PD, Lakey N, McCombie WR, Jeddeloh JA, Martienssen RA PLoS Biol. 3:e13(2005).