Stem-loop zma-MIR172a

Accession

MI0001493

Description

Zea mays zma-MIR172a precursor miRNA

Gene family

MIPF0000035; MIR172

Literature search

38 open access papers mention zma-MIR172a
(229 sentences)

Sequence

2029 reads, 5343 reads per million, 3 experiments

gcguggcaucaucaagauucacaacccaucaauccgaaccacugauuuggaaugcaugyaugAGAAUCUUGAUGAUGCUGCAu
..((((((((((((((((((.((...(((((.((((((.......)))))).)).)))..)).))))))))))))))))))..

Structure

gc                  a  acc   -  a      cc 
  guggcaucaucaagauuc ca   cau ca uccgaa  a
  |||||||||||||||||| ||   ||| || ||||||  c
  CGUCGUAGUAGUUCUAAG gu   gua gu agguuu  u
uA                  A  -ay   c  a      ag 

Annotation confidence Not enough data

Genome context

chr7: 54276707-54276789 [-]

Mature zma-miR172a

• Accession: MIMAT0001387
• Description: Zea mays zma-miR172a mature miRNA
• Sequence: 63 - AGAAUCUUGAUGAUGCUGCA - 82
• Evidence: not_experimental

References

1. Identifying microRNAs in plant genomes
   "Maher C, Timmermans M, Stein L, Ware D"
   "Proc IEEE CSB (2004) None:718-723