Accession
MI0001083
Description
Arabidopsis thaliana
ath-MIR156h precursor miRNA
Gene family
MIPF0000008;
MIR156
Literature search
80 open access papers mention ath-MIR156h
(799 sentences)
(799 sentences)
Sequence
augaaaaauguUGACAGAAGAAAGAGAGCACaaccugggauuagcaaaaagauaguuuugcccuugucgggagugugcucucuuuccuucugccaccaucauugcg
.......(((.((.((((((((((((((((((.(((((.(...((((((......))))))...).)))))..)))))))))))).)))))).)).))).......
.......(((.((.((((((((((((((((((.(((((.(...((((((......))))))...).)))))..)))))))))))).)))))).)).))).......
Structure
augaaaa u A - -a g uua ag
aug UG CAGAAG AAAGAGAGCACa ccugg a gcaaaa a
||| || |||||| |||||||||||| ||||| | ||||||
uac ac gucuuc uuucucucgugu gggcu u cguuuu u
gcguuac c c c ga g ucc ga
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
This sequence is a predicted paralogue of the previously identified miR156 family [1], subsequently verified in [2]. It is predicted to target mRNAs coding for Squamosa-promoter Binding Protein (SBP)-like transcription factors.
Genome context
chr5: 22597012-22597117 [-]
Database links
Mature ath-miR156h
| Accession | MIMAT0001013 |
| Description | Arabidopsis thaliana ath-miR156h mature miRNA |
| Sequence | 12 - UGACAGAAGAAAGAGAGCAC - 31 |
| Evidence |
experimental
454 [2], Illumina [3] |
References
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