Stem-loop sequence hsa-mir-335

AccessionMI0000816 (change log)
Symbol HGNC:MIR335
DescriptionHomo sapiens miR-335 stem-loop
Gene family MIPF0000196; mir-335
Literature search

169 open access papers mention hsa-mir-335
(864 sentences)

   -------u  -uu    c        a         c        u  gu 
5'         gu   ugag ggggguca gagcaauaa gaaaaaug uu  c
           ||   |||| |||||||| ||||||||| |||||||| ||   
3'         cg   acuc ccuccagu cucguuauu cuuuuugc aa  a
   acuuauau  uuu    u        c         a        c  au 
Get sequence
Deep sequencing
436960 reads, 3.78e+03 reads per million, 153 experiments
Confidence Annotation confidence: high
Feedback: Do you believe this miRNA is real?

This sequence is the predicted homologue of a miRNA cloned from rat neuronal tissue [1,2], later verified in human [3].

Genome context
Coordinates (GRCh38; GCA_000001405.15) Overlapping transcripts
chr7: 130496111-130496204 [+]
Database links

Mature sequence hsa-miR-335-5p

Accession MIMAT0000765
Previous IDshsa-miR-335

16 - 


 - 38

Get sequence
Deep sequencing416898 reads, 152 experiments
Evidence experimental; cloned [3-4]
Database links
Predicted targets

Mature sequence hsa-miR-335-3p

Accession MIMAT0004703
Previous IDshsa-miR-335*

52 - 


 - 73

Get sequence
Deep sequencing20052 reads, 135 experiments
Evidence experimental; cloned [3]
Database links
Predicted targets


PMID:14691248 "Identification of many microRNAs that copurify with polyribosomes in mammalian neurons" Kim J, Krichevsky A, Grad Y, Hayes GD, Kosik KS, Church GM, Ruvkun G Proc Natl Acad Sci U S A. 101:360-365(2004).
PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).
PMID:17616659 "Patterns of known and novel small RNAs in human cervical cancer" Lui WO, Pourmand N, Patterson BK, Fire A Cancer Res. 67:6031-6043(2007).