miRBase entry: hsa-mir-320a

Stem-loop hsa-mir-320a


Accession
MI0000542
Symbol
HGNC: MIR320A
Description
Homo sapiens hsa-mir-320a precursor miRNA
Gene family
MIPF0000163; mir-320

Literature search
201 open access papers mention hsa-mir-320a
(1392 sentences)

Sequence

1394928 reads, 6059 reads per million, 137 experiments
cuccccuccGCCUUCUCUUCCCGGUUCUUCCcggagucgggAAAAGCUGGGUUGAGAGGGCGAaaaaggaug
.(((....(((((((((..(((((((.((((((....)))))).)))))))..))))))))).....)))..

Structure
-c   -ccuc         UU       C      g 
  ucc     cGCCUUCUC  CCCGGUU UUCCcg a
  |||     |||||||||  ||||||| ||||||  
  agg     GCGGGAGAG  GGGUCGA AAgggc g
gu   aaaaA         UU       A      u 


Annotation confidence High
Do you think this miRNA is real?

Genome context
chr8: 22244966-22245037 [-]

Database links

Mature hsa-miR-320a-3p

Accession MIMAT0000510
Description Homo sapiens hsa-miR-320a-3p mature miRNA
Sequence 42 - AAAAGCUGGGUUGAGAGGGCGA - 63
Evidence experimental
cloned [1-4], Illumina [5]
Database links
Predicted targets

Mature hsa-miR-320a-5p

Accession MIMAT0037311
Description Homo sapiens hsa-miR-320a-5p mature miRNA
Sequence 10 - GCCUUCUCUUCCCGGUUCUUCC - 31
Evidence not_experimental

References

  1. PubMed ID: 14573789
    Reduced accumulation of specific microRNAs in colorectal neoplasia
    "Michael MZ, O' Connor SM, van Holst Pellekaan NG, Young GP, James RJ"
    "Mol Cancer Res (2003) 1:882-891

  2. PubMed ID: 15325244
    Altered expression profiles of microRNAs during TPA-induced differentiation of HL-60 cells
    "Kasashima K, Nakamura Y, Kozu T"
    "Biochem Biophys Res Commun (2004) 322:403-410

  3. PubMed ID: 17604727
    A mammalian microRNA expression atlas based on small RNA library sequencing
    "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
    "Cell (2007) 129:1401-1414

  4. PubMed ID: 17616659
    Patterns of known and novel small RNAs in human cervical cancer
    "Lui WO, Pourmand N, Patterson BK, Fire A"
    "Cancer Res (2007) 67:6031-6043

  5. PubMed ID: 20158877
    Analysis of deep sequencing microRNA expression profile from human embryonic stem cells derived mesenchymal stem cells reveals possible role of let-7 microRNA family in downstream targeting of hepatic nuclear factor 4 alpha
    Koh W, Sheng CT, Tan B, Lee QY, Kuznetsov V, Kiang LS, Tanavde V
    BMC Genomics (2010) 11:S6