Stem-loop sequence hsa-mir-125a

AccessionMI0000469 (change log)
Symbol HGNC:MIR125A
DescriptionHomo sapiens miR-125a stem-loop
Gene family MIPF0000033; mir-10
Literature search

389 open access papers mention hsa-mir-125a
(1709 sentences)

   u     u u     uc  ug   c    ua        ----  a 
5'  gccag c cuagg  cc  aga ccuu  accuguga    gg c
    ||||| | |||||  ||  ||| ||||  ||||||||    ||  
3'  cgguc g ggucc  gg  ucu ggag  uggacacu    cc a
   c     u c     ga  gu   u    --        ggga  u 
Get sequence
Deep sequencing
1154935 reads, 3.99e+03 reads per million, 159 experiments
Confidence Annotation confidence: high
Feedback: Do you believe this miRNA is real?

This miRNA sequence is predicted based on homology to a verified miRNA from mouse [1], later verified in human [2].

Genome context
Coordinates (GRCh38; GCA_000001405.15) Overlapping transcripts
chr19: 51693254-51693339 [+]
OTTHUMT00000465190 ; SIGLEC20P-001; intron 6
ENST00000595243 ; SIGLEC20P-001; intron 6
Clustered miRNAs
< 10kb from hsa-mir-125a
hsa-mir-99bchr19: 51692612-51692681 [+]
hsa-let-7echr19: 51692786-51692864 [+]
hsa-mir-125achr19: 51693254-51693339 [+]
Database links

Mature sequence hsa-miR-125a-5p

Accession MIMAT0000443
Previous IDshsa-miR-125a

15 - 


 - 38

Get sequence
Deep sequencing1146942 reads, 159 experiments
Evidence experimental; cloned [2-3]
Database links
Predicted targets

Mature sequence hsa-miR-125a-3p

Accession MIMAT0004602

53 - 


 - 74

Get sequence
Deep sequencing7970 reads, 150 experiments
Evidence experimental; cloned [2-3]
Database links
Predicted targets


PMID:12007417 "Identification of tissue-specific microRNAs from mouse" Lagos-Quintana M, Rauhut R, Yalcin A, Meyer J, Lendeckel W, Tuschl T Curr Biol. 12:735-739(2002).
PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).
PMID:17616659 "Patterns of known and novel small RNAs in human cervical cancer" Lui WO, Pourmand N, Patterson BK, Fire A Cancer Res. 67:6031-6043(2007).