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miRBase |
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Stem-loop sequence hsa-mir-215 |
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Accession | MI0000291 (change log) | |||||
Symbol | HGNC:MIR215 | |||||
Description | Homo sapiens miR-215 stem-loop | |||||
Gene family | MIPF0000063; mir-192 | |||||
Literature search |
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102 open access papers mention hsa-mir-215 | |||||
Stem-loop |
aucauuca a ------ a a a -u u uaua 5' gaa ugguau acagga a ug ccua gaa ugacagacaa g ||| |||||| |||||| | || |||| ||| |||||||||| c 3' cuu aucgug ugucuu u ac ggau cuu acugucuguu u ------aa c ucagua a a c uu u ugag |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Comments |
This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences [1]. Expression of the excised miR has been validated in zebrafish, and the 5' end mapped by PCR. Landgraf et al. confirm expression in human [2]. |
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence hsa-miR-215-5p |
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Accession | MIMAT0000272 |
Sequence |
27 - augaccuaugaauugacagac - 47 |
Deep sequencing | 883731 reads, 159 experiments |
Evidence | experimental; cloned [2], Illumina [3] |
Database links |
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Predicted targets |
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Mature sequence hsa-miR-215-3p |
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Accession | MIMAT0026476 |
Sequence |
64 - ucugucauuucuuuaggccaaua - 86 |
Deep sequencing | 20 reads, 12 experiments |
Evidence | experimental; Illumina [3] |
Predicted targets |
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References |
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1 |
PMID:12624257
"Vertebrate microRNA genes"
Science. 299:1540(2003).
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2 |
PMID:17604727
"A mammalian microRNA expression atlas based on small RNA library sequencing"
Cell. 129:1401-1414(2007).
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3 |
PMID:23034410
"Birth and expression evolution of mammalian microRNA genes"
Genome Res. 23:34-45(2013).
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