Stem-loop sequence hsa-mir-139

AccessionMI0000261 (change log)
Symbol HGNC:MIR139
DescriptionHomo sapiens miR-139 stem-loop
Gene family MIPF0000117; mir-139
Literature search

116 open access papers mention hsa-mir-139
(658 sentences)

   gug       -   u  a            g gg 
5'    uauucua cag gc cgugucuccagu u  c
      ||||||| ||| || |||||||||||| |  u
3'    augaggu guc cg gcgcagaggucg a  c
   -ca       u   c  -            g gg 
Get sequence
Deep sequencing
106525 reads, 195 reads per million, 155 experiments
Confidence Annotation confidence: high
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The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2].

Genome context
Coordinates (GRCh38; GCA_000001405.15) Overlapping transcripts
chr11: 72615063-72615130 [-]
OTTHUMT00000329378 ; FCHSD2-001; intron 8
OTTHUMT00000397326 ; FCHSD2-008; intron 8
OTTHUMT00000329430 ; FCHSD2-003; intron 9
OTTHUMT00000329429 ; FCHSD2-002; intron 9
OTTHUMT00000329431 ; FCHSD2-004; intron 9
ENST00000311172 ; FCHSD2-001; intron 8
ENST00000458644 ; FCHSD2-008; intron 8
ENST00000409314 ; FCHSD2-003; intron 9
ENST00000409418 ; FCHSD2-002; intron 9
ENST00000409853 ; FCHSD2-004; intron 9
Database links

Mature sequence hsa-miR-139-5p

Accession MIMAT0000250
Previous IDshsa-miR-139

7 - 


 - 29

Get sequence
Deep sequencing85265 reads, 153 experiments
Evidence experimental; cloned [2]
Database links
Predicted targets

Mature sequence hsa-miR-139-3p

Accession MIMAT0004552

43 - 


 - 65

Get sequence
Deep sequencing21220 reads, 136 experiments
Evidence experimental; cloned [2]
Database links
Predicted targets


PMID:12007417 "Identification of tissue-specific microRNAs from mouse" Lagos-Quintana M, Rauhut R, Yalcin A, Meyer J, Lendeckel W, Tuschl T Curr Biol. 12:735-739(2002).
PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).