Stem-loop hru-mir-100

Accession

MI0049310

Description

Haliotis rufescens hru-mir-100 precursor miRNA

Sequence

aaguuugcuguguuaaagccacacuggacaAACCCGUAGAUCCGAACUUGUGcuggcuuggugaucgCAAGCUCGCGUCUACGUGUCUGuguugcuguggaaacaaucaaaacacaggu
.......(((((((..(((.((((.(((((....(((((((.(((.((((((.(.((...)).).)))))).))).)))))))))))))))).)))((....))......)))))))..

Structure

aaguuug       ------------aa   c    u     AACC       C   A      c g  u 
       cuguguu              agc acac ggaca    CGUAGAU CGA CUUGUG u gc  
       |||||||              ||| |||| |||||    ||||||| ||| |||||| | || u
       gacacaa              ucg uguG UCUGU    GCAUCUG GCU GAACgc a ug  
-----ug       aacuaacaaaggug   u    -     ----       C   C      u g  g 

Annotation confidence Not enough data

Genome context

JALGQA010000018.1: 20623900-20623958 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from hru-mir-100

Mature hru-miR-100-5p

• Accession: MIMAT0076644
• Description: Haliotis rufescens hru-miR-100-5p mature miRNA
• Sequence: 31 - AACCCGUAGAUCCGAACUUGUG - 52
• Evidence: not_experimental

Mature hru-miR-100-3p

• Accession: MIMAT0076645
• Description: Haliotis rufescens hru-miR-100-3p mature miRNA
• Sequence: 68 - CAAGCUCGCGUCUACGUGUCUG - 89
• Evidence: not_experimental

References