miRBase entry: isc-mir-252a

Stem-loop isc-mir-252a


Accession
MI0049123
Description
Ixodes scapularis isc-mir-252a precursor miRNA


Sequence


aagaugucuccggccgugugacacuccgggCUAAGUACUAGCGCCGUAGGAGugggguuuucggcuacuCCUGCAGCCUUGGUGCUUACCCcgggggcgucacguugcagcgcuucaccca
..((.((((.((((...(((((.(((((((.((((((((((.((.((((((((((.........)))))))))).)).)))))))))).)))))))..))))))))).)).)).)).....

Structure
---aa  u  -  c    cgu     -a       C          C  C          ggu 
     ga gu cu cggc   gugac  cuccggg UAAGUACUAG GC GUAGGAGugg   u
     || || || ||||   |||||  ||||||| |||||||||| || ||||||||||   u
     cu cg ga guug   cacug  ggggcCC AUUCGUGGUU CG CGUCCucauc   u
accca  u  c  c    ---     cg       C          C  A          ggc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
ref|NW_024609884.1|: 72491884-72492004 [-]

Database links

Mature isc-miR-252a-5p

Accession MIMAT0076272
Description Ixodes scapularis isc-miR-252a-5p mature miRNA
Sequence 31 - CUAAGUACUAGCGCCGUAGGAG - 52
Evidence not_experimental

Mature isc-miR-252a-3p

Accession MIMAT0076273
Description Ixodes scapularis isc-miR-252a-3p mature miRNA
Sequence 70 - CCUGCAGCCUUGGUGCUUACCC - 91
Evidence not_experimental

References