miRBase entry: tur-mir-279b

Stem-loop tur-mir-279b


Accession
MI0048832
Description
Tetranychus urticae tur-mir-279b precursor miRNA


Sequence


aaauucaacgccacuuugacaaugaugaugAAUGAGUUCGGGCCUGUCCAUGuguucauguuaaaauucaUGACUAGACCCAUACUCAUCCAuuauuguuguauuuucaucggcuaaauauu
.........(((......((((((((((((.((((((..(((.(((((.(((.(((........))).)))))).)).)))..)))))).)))))))))))).........)))........

Structure
aaauucaac   ---acuuug            A      UC   C  -   C   u   cau 
         gcc         acaaugaugaug AUGAGU  GGG CU GUC AUG guu   g
         |||         |||||||||||| ||||||  ||| || ||| ||| |||    
         cgg         uguuguuauuAC UACUCA  CCC GA CAG Uac uaa   u
-uuauaaau   cuacuuuua            C      UA   A  U   -   u   aau 


Annotation confidence Not enough data
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Genome context
emb|HE587309|: 1091903-1092024 [+]
Clustered miRNAs
7 other miRNAs are < 10 kb from tur-mir-279b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature tur-miR-279b-5p

Accession MIMAT0075710
Description Tetranychus urticae tur-miR-279b-5p mature miRNA
Sequence 31 - AAUGAGUUCGGGCCUGUCCAUG - 52
Evidence not_experimental

Mature tur-miR-279b-3p

Accession MIMAT0075709
Description Tetranychus urticae tur-miR-279b-3p mature miRNA
Sequence 71 - UGACUAGACCCAUACUCAUCCA - 92
Evidence not_experimental

References