miRBase entry: tur-mir-279b-1

Stem-loop tur-mir-279b-1


Accession
MI0048831
Description
Tetranychus urticae tur-mir-279b-1 precursor miRNA


Sequence


auuuuuaucccauacuggacacuuugacugGAUGAAUGCGUUUCUAGACCAUGuucauguugaacuauucaUGACUAGAUCCACAUUCAUCCAggcaaccaauugauucaaacccaaauugga
.......(((......)))....(((.(((((((((((.(..(((((..((((((((...))))).....))).)))))..).))))))))))).)))((((((............)))))).

Structure
--auuuuuaucccauacuggacacu   a           C UU     AC   -----     u 
                         uug cugGAUGAAUG G  UCUAG  CAU     Guuca  
                         ||| ||||||||||| |  |||||  |||     ||||| g
                         aac gACCUACUUAC C  AGAUC  GUa     caagu  
agguuaaacccaaacuuaguuaacc   g           A CU     -A   cuuau     u 


Annotation confidence Not enough data
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Genome context
emb|HE587308|: 2468570-2468692 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from tur-mir-279b-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature tur-miR-279b-1-5p

Accession MIMAT0075708
Description Tetranychus urticae tur-miR-279b-1-5p mature miRNA
Sequence 31 - GAUGAAUGCGUUUCUAGACCAUG - 53
Evidence not_experimental

Mature tur-miR-279b-1-3p

Accession MIMAT0075707
Description Tetranychus urticae tur-miR-279b-1-3p mature miRNA
Sequence 72 - UGACUAGAUCCACAUUCAUCCA - 93
Evidence not_experimental

References