miRBase entry: tur-mir-5731-3

Stem-loop tur-mir-5731-3


Accession
MI0048824
Description
Tetranychus urticae tur-mir-5731-3 precursor miRNA


Sequence


ucaagaaauuuaagaauguacacuuguuugGACACAGCCUAGGAGCACAUGUagcagaauaaagauuuucauauuuuuuucugcauaaaaaacuacAUGGGCACCUAGGCUAUGUCCAaucagguguaucagaaucaucagaaaucau
.................(((((((((.(((((((.((((((((.((.((((((((((((.((((((......)))))))))))).........)))))).)).)))))))).))))))).)))))))))...................

Structure
--ucaagaaauuuaagaau         u       C        A  A      ---------      u      uu 
                   guacacuug uugGACA AGCCUAGG GC CAUGUa         gcagaa aaagau  u
                   ||||||||| ||||||| |||||||| || ||||||         |||||| ||||||   
                   uauguggac aACCUGU UCGGAUCC CG GUAcau         cgucuu uuuuua  c
uacuaaagacuacuaagac         u       A        A  G      caaaaaaua      -      ua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
emb|HE587494|: 6171-6318 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from tur-mir-5731-3
Name Accession Chromosome Start End Strand Confidence




Database links

Mature tur-miR-5731-3-5p

Accession MIMAT0075694
Description Tetranychus urticae tur-miR-5731-3-5p mature miRNA
Sequence 31 - GACACAGCCUAGGAGCACAUGU - 52
Evidence not_experimental

Mature tur-miR-5731-3-3p

Accession MIMAT0075693
Description Tetranychus urticae tur-miR-5731-3-3p mature miRNA
Sequence 97 - AUGGGCACCUAGGCUAUGUCCA - 118
Evidence not_experimental

References