Stem-loop sma-mir-87

Accession

MI0048802

Description

Schistosoma mansoni sma-mir-87 precursor miRNA

Sequence

uuucaauuuuaaucuaccgagaacuuguacCCGCCUGUAACUAUGCUCAAACCAaauaacgauuaaacuuauugagaauuuucugauuaaaucaacaaaaaaaagaaaagaaauauuauuccaucaaaacuaaucgauauucaaugaauuuaccaaaaaauaaucaauuaugaauaucauuagugagaauaauguuucuauucagaaaauuuuucucaauuuuguuuaauuaucuucuuuugauugGUGAGCAAAGUUUCAGGUGUGUcaacauucgguugaacaucuuuaauugauu
..((((((....((.((((((...(((.((.((((((.((((.(((((..(((((.(((.((((((((..((((((((((((((((......................(((((((((((((..((...((((((.((((((((.(((((((......))))..)))....)))))))))))))))))))))))))))))..)))))))))...)))))))...))))))))........))).)))))))))).)))).)))))).)))))..)))))).))........))))))..

Structure

uu      ----uuaa  u      aac   u  C      U    A     AA     a   -------c        -uu       ---         uuaaaucaacaaaaaaaagaaa             ca  aaa      c        ---a   --    ac 
  ucaauu        uc accgag   uug ac CGCCUG AACU UGCUC  ACCAa uaa        gauuaaac   auugaga   auuuucuga                      agaaauauuauuc  uc   acuaau gauauuca    uga  auuu  c
  ||||||        || ||||||   ||| || |||||| |||| |||||  ||||| |||        ||||||||   |||||||   |||||||||                      |||||||||||||  ||   |||||| ||||||||    |||  ||||   
  aguuaa        ag uggcuu   aac UG GUGGAC UUGA ACGAG  UGguu guu        uuaauuug   uaacucu   uaaaagacu                      ucuuuguaauaag  ag   ugauua cuauaagu    acu  uaaa  a
uu      uuucuaca  u      -ac   -  U      U    A     --     a   uucuucua        uuu       uuu         --------------------ua             --  ---      -        auua   aa    aa 

Annotation confidence Not enough data

Genome context

3: 12868954-12869251 [-]

Mature sma-miR-87-5p

• Accession: MIMAT0075650
• Description: Schistosoma mansoni sma-miR-87-5p mature miRNA
• Sequence: 31 - CCGCCUGUAACUAUGCUCAAACCA - 54
• Evidence: not_experimental

Mature sma-miR-87-3p

• Accession: MIMAT0075649
• Description: Schistosoma mansoni sma-miR-87-3p mature miRNA
• Sequence: 247 - GUGAGCAAAGUUUCAGGUGUGU - 268
• Evidence: not_experimental

References