Stem-loop sma-mir-133

Accession

MI0048800

Description

Schistosoma mansoni sma-mir-133 precursor miRNA

Sequence

gugaauaauaauggacagcuuaccacuagaUGCUGUUUGUUAGGGUACGAAAAucauacacaauuguaaaugaucuuuucauauaccagcacacauauguacagaacuaauacuaaagauaauuauacacauauuuaaaucaugaaagcuaaccguaaacgguaaaucaugauuuauuuuauguguaagauguguucuguuaugaaaugaauuauaauuguguauguuacuguuacaagauuUUGGUCCCUAUCAACCAGCUAUaguggauagccucaacaucacauuaauugu
((((.......((....(((..((((((...((((.(((.(((((.((.((((((((((((((((((((....((.(((((((...(((.((((((..(((.........)))............((((((((..((((((((((......((((....))))...))))))))))...))))))))..)))))).))).))))))).)).)))))))))))))).............)))))).))))))).))).))))..))))))..))).....)))))).........

Structure

---------    auaauaa  -gaca   ua      gaU    U   U     U  G      -------------              auga  u       uac   c      auguacagaacuaauacuaaagauaauua        -uu          aagcua    u 
         guga       ug     gcu  ccacua   GCUG UUG UAGGG AC AAAAuc             auacacaauuguaa    uc uuucaua   cag acacau                             uacacaua   uaaaucauga      accg a
         ||||       ||     |||  ||||||   |||| ||| ||||| || ||||||             ||||||||||||||    || |||||||   ||| ||||||                             ||||||||   ||||||||||      ||||  
         cacu       ac     cga  ggugaU   CGAC AAC AUCCC UG UUuuag             uauguguuaauauu    ag aaaguau   guc ugugua                             auguguau   auuuaguacu      uggc a
uguuaauua    -------  aacuc   ua      -AU    C   U     -  G      aacauugucauug              ---a  u       --u   u      ---------------------------ga        uuu          ---aaa    a 

Annotation confidence Not enough data

Genome context

PAR2: 17266064-17266357 [+]

Mature sma-miR-133-5p

• Accession: MIMAT0075646
• Description: Schistosoma mansoni sma-miR-133-5p mature miRNA
• Sequence: 31 - UGCUGUUUGUUAGGGUACGAAAA - 53
• Evidence: not_experimental

Mature sma-miR-133-3p

• Accession: MIMAT0075645
• Description: Schistosoma mansoni sma-miR-133-3p mature miRNA
• Sequence: 243 - UUGGUCCCUAUCAACCAGCUAU - 264
• Evidence: not_experimental

References