Accession
MI0048798
Description
Schistosoma mansoni
sma-mir-13379 precursor miRNA
Sequence
auaugauugauuauauuguguauugaaaaUUGGGCAGUUGGUGUAUUUCCAccucaaaauaaaaaaaaaacaaaaacauaauucaacaaaguucguuuuuaauuugaucuauugaaaaaaagaucaaauuaaaugaauuuauguugaauaugugAAAAUGCAUCAUCUACCCUAGAuaucaauacauagaacaucauuauuuugau
..(((((.(((....(((((((((((.....(((.((.((((((((((...........................(((((.((((((((((((((((..(((((((((((.((....)).)))))))))))))))))))).))))))))))))..)))))))))).)).)))......)))))))))))...))))))))......
..(((((.(((....(((((((((((.....(((.((.((((((((((...........................(((((.((((((((((((((((..(((((((((((.((....)).)))))))))))))))))))).))))))))))))..)))))))))).)).)))......)))))))))))...))))))))......
Structure
----au u uaua -aaaUU C U CCAccucaaaauaaaaaaaaaacaaaa a - uu a g
augau gau uuguguauuga GGG AG UGGUGUAUUU acaua uucaaca aaguucguu uaauuugaucu uu a
||||| ||| ||||||||||| ||| || |||||||||| ||||| ||||||| ||||||||| ||||||||||| ||
uauua cua gauacauaacu CCC UC ACUACGUAAA uguau aaguugu uuuaaguaa auuaaacuaga aa a
uaguuu - -caa auAGAU A U -------------------------Ag - a -- a a
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
4: 36604181-36604386 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from sma-mir-13379
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature sma-miR-13379-5p
| Accession | MIMAT0075642 |
| Description | Schistosoma mansoni sma-miR-13379-5p mature miRNA |
| Sequence | 30 - UUGGGCAGUUGGUGUAUUUCCA - 51 |
| Evidence | not_experimental |
Mature sma-miR-13379-3p
| Accession | MIMAT0075641 |
| Description | Schistosoma mansoni sma-miR-13379-3p mature miRNA |
| Sequence | 155 - AAAAUGCAUCAUCUACCCUAGA - 176 |
| Evidence | not_experimental |
References
|
|
