Accession
MI0048797
Description
Schistosoma mansoni
sma-mir-277 precursor miRNA
Sequence
uguacaugcaaguaacuguguucaaggucAUGGGACGGAAAUGCUUACUUACAuaacuacuaguaaucucucaucaguagaacuaauaugaaaaaaaagcauacagguuuacugaugaugaaauuacucauuauucauuauauugUAAAUGCAUUUUCUGGCCCGUAAcuaauacacaaugaacaccucuuauaucug
.................(((((((.(((.(((((.(((((((((....(((((........((((((.(((((((((((((.((..((((.........))))..))))))))))))).)).))))))...............)))))..))).)))))).))))).))).........)))))))............
.................(((((((.(((.(((((.(((((((((....(((((........((((((.(((((((((((((.((..((((.........))))..))))))))))))).)).))))))...............)))))..))).)))))).))))).))).........)))))))............
Structure
uguacaugcaaguaacu --------a c A - UUAC -------uaacuacu c - a aa aaa
guguuca ggu AUGGG CGGAAA UGC UUACA aguaau uc ucaucaguaga cu uaug a
||||||| ||| ||||| |||||| ||| ||||| |||||| || ||||||||||| || |||| a
cacaagu ucA UGCCC GUCUUU ACG AAUgu ucauua ag aguagucauuu gg auac a
-----gucuauauucuc aacacauaa A G U --UA uauauuacuuauuac a u - ac gaa
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
4: 36604454-36604651 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from sma-mir-277
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature sma-miR-277-5p
| Accession | MIMAT0075640 |
| Description | Schistosoma mansoni sma-miR-277-5p mature miRNA |
| Sequence | 30 - AUGGGACGGAAAUGCUUACUUACA - 53 |
| Evidence | not_experimental |
Mature sma-miR-277-3p
| Accession | MIMAT0075639 |
| Description | Schistosoma mansoni sma-miR-277-3p mature miRNA |
| Sequence | 146 - UAAAUGCAUUUUCUGGCCCGUAA - 168 |
| Evidence | not_experimental |
References
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