Accession
MI0048796
Description
Schistosoma mansoni
sma-mir-13378 precursor miRNA
Sequence
uauauaaauauacauaaaccagguauguaaAAGUUGGAAGGCCAGAUUUAGCGaauauucacaacuguaaucuucaaauaacuuguucucaacgauaaaauugucaucaauuaauagaaguacauguacacuaaaugaaauuaugacugagaauucaguuaacauucauagaacaaguuaguuacuagugaguagaaggauucuaccgCCAGAUCUGUCGCUUCCAACUCUAcaaauucuggcuuaacagcuuuaacuaugu
..............(((.(((((..((((..((((((((((.(((((((.(((.....((((....(((((.......(((((((((((.........(((((....)))))......(((........)))..(((((....(((((((....)))))))...)))))))))))))))))))))..))))((((((...))))))))).))))))).).))))))))).))))...))))).)))................
..............(((.(((((..((((..((((((((((.(((((((.(((.....((((....(((((.......(((((((((((.........(((((....)))))......(((........)))..(((((....(((((((....)))))))...)))))))))))))))))))))..))))((((((...))))))))).))))))).).))))))))).))))...))))).)))................
Structure
--uauauaaauauaca a -ua aA - C A ----------aauau aacu cuucaaa caacgauaaaauugucaucaauuaauagaaguacauguacacuaa auua g
uaa ccagg ugua AGUUGGAAG G CAGAUUU GCG ucac guaau uaacuuguucu augaa ugacuga a
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auu ggucu acAU UCAACCUUC C GUCUAGA Cgc agug cauug auugaacaaga uacuu auugacu a
uguaucaauuucgaca c uaa -C G U C caucuuaggaagaug --au ------- --------------------------------------------- -aca u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
Z: 7214802-7215063 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from sma-mir-13378
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature sma-miR-13378-5p
| Accession | MIMAT0075638 |
| Description | Schistosoma mansoni sma-miR-13378-5p mature miRNA |
| Sequence | 31 - AAGUUGGAAGGCCAGAUUUAGCG - 53 |
| Evidence | not_experimental |
Mature sma-miR-13378-3p
| Accession | MIMAT0075637 |
| Description | Schistosoma mansoni sma-miR-13378-3p mature miRNA |
| Sequence | 209 - CCAGAUCUGUCGCUUCCAACUCUA - 232 |
| Evidence | not_experimental |
References
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