miRBase entry: aqu-mir-2016-2

Stem-loop aqu-mir-2016-2


Accession
MI0048791
Description
Amphimedon queenslandica aqu-mir-2016-2 precursor miRNA


Sequence


ccugguagccuauagaguguccauggguuguagauugggcuuggucggcagaugagcuauuacauaccauacugauacuauacuggccuacaguguacaguaucagucaguggugaaucaucUGCUGGUUGAGUCCAGUCUACAaaccagucacucuacacucaaggucuucuc
(((.(.((....(((((((....(((..(((((((((((((((((((((((((((.........(((((((((((((((((((((.....))))))..)))))))))..))))))..)))))))))))))))))))))))))))..)))..)))))))..))).))).......

Structure
-------   g u  ccua       ucca   gu                           gcuauuaca      --         --      g 
       ccu g ag    uagagug    ugg  uguagauugggcuuggucggcagauga         uaccau  acugauacu  auacug c
       ||| | ||    |||||||    |||  |||||||||||||||||||||||||||         ||||||  |||||||||  |||||| c
       gga c uc    aucucac    acc  ACAUCUGACCUGAGUUGGUCGUcuacu         guggug  ugacuauga  ugugac u
cucuucu   a -  --ac       --ug   aa                           -------aa      ac         ca      a 


Annotation confidence Not enough data
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Genome context
NW_003546250.1: 89373-89486 []
Clustered miRNAs
1 other miRNA is < 10 kb from aqu-mir-2016-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature aqu-miR-2016-2-3p

Accession MIMAT0075629
Description Amphimedon queenslandica aqu-miR-2016-2-3p mature miRNA
Sequence 123 - UGCUGGUUGAGUCCAGUCUACA - 144
Evidence not_experimental

References