Stem-loop lgi-mir-2h

Accession

MI0048777

Description

Lottia gigantea lgi-mir-2h precursor miRNA

Sequence

cgaaggugugaaaauauuuguguaacuguuCCGUCUAAGUGGUUGUGAUUAGuuuuguuauuucuUAUCACAGCCUGCUUAGAUCGGCAuugugcacaaaauaucaacaauguuaugcc
....(((((((..(((((((((((.(.((.(((((((((((((((((((.((...........)).))))))))).))))))).))).)).)))))).))))))........)))))))

Structure

cgaa       ------aa      -     a u  u   -       -         U  uuuu 
    gguguga        auauuu gugua c gu CCG UCUAAGU GGUUGUGAU AG    g
    |||||||        |||||| ||||| | || ||| ||||||| ||||||||| ||    u
    ccguauu        uauaaa cacgu g uA GGC AGAUUCG CCGACACUA uc    u
----       guaacaac      a     - u  C   U       U         U  uuua 

Annotation confidence Not enough data

Genome context

LOTGIsca_2: 4514299-4514357 []

Clustered miRNAs

2 other miRNAs are < 10 kb from lgi-mir-2h

Mature lgi-miR-2h-5p

• Accession: MIMAT0075602
• Description: Lottia gigantea lgi-miR-2h-5p mature miRNA
• Sequence: 31 - CCGUCUAAGUGGUUGUGAUUAG - 52
• Evidence: not_experimental

Mature lgi-miR-2h-3p

• Accession: MIMAT0075601
• Description: Lottia gigantea lgi-miR-2h-3p mature miRNA
• Sequence: 66 - UAUCACAGCCUGCUUAGAUCGGCA - 89
• Evidence: not_experimental

References