Stem-loop bfl-let-7-1

Accession

MI0048680

Description

Branchiostoma floridae bfl-let-7-1 precursor miRNA

Sequence

caucggcuugacuucuguauggcccugaggUGAGGUAGUAGGUUGUAUAGUUcagaaguacaacauuggagaugaCUGUACAACCCGUUACCUUUUUucgggucauaccacgcuucuggaccucuug
....((((.((.....(((((((((.((((.(((((((..(((((((((((.((......((....))....)))))))))))))..))))))).)))))))))))))......)).)).)).....

Structure

-cauc  -  u  -cuucu         u    U       UA           U  gaagua  a 
     gg cu ga      guauggccc gagg GAGGUAG  GGUUGUAUAGU ca      ca c
     || || ||      ||||||||| |||| |||||||  ||||||||||| ||      ||  
     cc gg cu      cauacuggg cuUU UUCCAUU  CCAACAUGUCa gu      gu a
guucu  a  u  ucgcac         -    U       GC           -  --agag  u 

Annotation confidence Not enough data

Genome context

ref|NC_049979.1|: 15364051-15364177 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from bfl-let-7-1

Mature bfl-let-7-1-5p

• Accession: MIMAT0075417
• Description: Branchiostoma floridae bfl-let-7-1-5p mature miRNA
• Sequence: 31 - UGAGGUAGUAGGUUGUAUAGUU - 52
• Evidence: not_experimental

Mature bfl-let-7-1-3p

• Accession: MIMAT0075418
• Description: Branchiostoma floridae bfl-let-7-1-3p mature miRNA
• Sequence: 76 - CUGUACAACCCGUUACCUUUUU - 97
• Evidence: not_experimental

References