miRBase entry: bfl-mir-13347

Stem-loop bfl-mir-13347


Accession
MI0048671
Description
Branchiostoma floridae bfl-mir-13347 precursor miRNA


Sequence


caaggaucugaucuagaggaccguaaggacCAGUGGUCCCACCGUGGCUCGugaacucuggauaccgAGCCUACGGCUGGACCUCUAGUcauuggguucuccugugcuacuauuuaaac
.........(..(..(((((((.(((.(((.((.(((((..((((((((((..............)))))).))))..))))).)).))).))))))))))..)..)............

Structure
---caaggaucu au ua       g   g   C  U     CA    -      ugaacu 
            g  c  gaggacc uaa gac AG GGUCC  CCGU GGCUCG      c
            |  |  ||||||| ||| ||| || |||||  |||| ||||||       
            c  g  cucuugg guu cUG UC CCAGG  GGCA CCGAgc      u
caaauuuaucau gu uc       -   a   A  U     UC    U      cauagg 


Annotation confidence Not enough data
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Genome context
ref|NC_049990.1|: 15554330-15554448 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from bfl-mir-13347
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bfl-miR-13347-5p

Accession MIMAT0075402
Description Branchiostoma floridae bfl-miR-13347-5p mature miRNA
Sequence 31 - CAGUGGUCCCACCGUGGCUCG - 51
Evidence not_experimental

Mature bfl-miR-13347-3p

Accession MIMAT0075403
Description Branchiostoma floridae bfl-miR-13347-3p mature miRNA
Sequence 68 - AGCCUACGGCUGGACCUCUAGU - 89
Evidence not_experimental

References