miRBase entry: xla-mir-29d-1

Stem-loop xla-mir-29d-1


Accession
MI0048596
Description
Xenopus laevis xla-mir-29d-1 precursor miRNA


Sequence


aacuaagaguaaaaaucacuuuuucaggagGCUGGUUUCAUGUGGUGGUUUAGAuuuaacugcacaaugucUAGCACCAUAUGAAAUCAGUGUccuuagaaagggaauuccugaacuaccaaa
......((((.....((.((((((.((((.(((((((((((((((((..((((((.............))))))))))))))))))))))).)))).)))))).)))))).............

Structure
-------aacuaa    aaaaa  a      c    g                 GU      uuaac 
             gagu     uc cuuuuu agga GCUGGUUUCAUGUGGUG  UUAGAu     u
             ||||     || |||||| |||| |||||||||||||||||  ||||||     g
             cuua     ag gaaaga uccU UGACUAAAGUAUACCAC  GAUcug     c
aaaccaucaaguc    -----  g      u    G                 --      uaaca 


Annotation confidence Not enough data
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Genome context
NC_030728.1: 75323477-75323539 []
Clustered miRNAs
1 other miRNA is < 10 kb from xla-mir-29d-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature xla-miR-29d-5p

Accession MIMAT0075294
Description Xenopus laevis xla-miR-29d-5p mature miRNA
Sequence 31 - GCUGGUUUCAUGUGGUGGUUUAGA - 54
Evidence not_experimental

Mature xla-miR-29d-3p

Accession MIMAT0075293
Description Xenopus laevis xla-miR-29d-3p mature miRNA
Sequence 72 - UAGCACCAUAUGAAAUCAGUGU - 93
Evidence not_experimental

References